dnaase

Bis-tools

A collection of tools to deal with Bisulfite-seq/NOMe-seq (SNP/Methylation calling: BisSNP; HMM segmentation: DMNTools; Visualization/Clustering: alignWigToBed; )

epifluidlabwebsite

awesome-deepbio

A curated list of awesome deep learning applications in the field of computational biology

finaledb_portal

gatk

GATK Official Release Repository: contains the core MIT-licensed GATK framework, free for all uses

QRF

A meQTL/eQTL detection method based on random forest model by using recombination rate and HiC signal to boost the power

QtlWater

research-group-web

a template for research group sites

UXM_deconv

wgbs_tools

tools for working with Bisulfite Sequencing data while preserving reads intrinsic dependencies