dmwelch / python-neuroimaging-lesson

Lessons on neuroimaging analysis with Python

python-neuroimaging-lesson

Lessons on neuroimaging analysis with Python

Instructions

To run these notebooks, you will need to install the IPython software, and a few other scientific libraries. One way to install these is by using the (free) Anaconda software distribution:

• Go to the Anaconda website and follow the instructions therein to download and install the distribution for your platform.

You will also need the nibabel library:

• To install nibabel in a terminal command line execute:

    pip install nibabel
  

Once you have followed these instructions, you should have all the software needed installed on your computer. To start running the notebooks, change the working directory of your terminal to the directory where you have downloaded the notebook files (using cd) and type:

ipython notebook

A browser window should open with a list of notebook files. Start by reading the index notebook and follow the instructions from there.