Davide Cozzi's repositories

Appunti

https://dlcgold.github.io/Appunti/

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muPBWT

A PBWT-based light index for UK Biobank scale genotype data.

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LUAD-PiCnIc

Project for the course "Data and Computational Biology" at Università degli Studi di Milano-Bicocca, made with @illoxian

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energy_drink-license

The Energy Drink License - A software license for (super)humans :boom:

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rlpbwt

C++ implementation of the run-length encoded positional Burrows-Wheeler transform for set-maximal exact matches computation

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succint-dbg-rs

Porting draft of succint De Bruijn Graph by Alex Bowe

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Appunti-universitari

Raccolta di vari appunti in formato .docx o .tex

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Master-Thesis

CS master thesis (ITA)

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bact-project

Data science lab in biosciences project on bacterial infections annotated in KEGG

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galig

A graph aligner

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bioconda-recipes

Conda recipes for the bioconda channel.

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cais

cais: A tool for computing several BWT varians using the conjugate array induced sorting algorithm.

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DaveAppunti

Sono i magici appunti di Dave :33

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htslib

C library for high-throughput sequencing data formats

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moni

MONI: A Pangenomic Index for Finding MEMs

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muPBWT-1KGP-workflow

Snakemake workflow to test μ-PBWT against PBWT and Syllable-PBWT

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pbwt

Implementation of Positional Burrows-Wheeler Transform for genetic data

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sdsl-lite

Succinct Data Structure Library 2.0

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ShapedSlp

SLP encodings that support substring extraction

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sux

Succinct data structures in C/C++

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