djhshih

David J. H. Shih's repositories

biopkgs

Bioinformatics Nix packages collection

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patefiant

Scripts for deploying local installations of select Linux programs

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cshkg

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djhshih.github.io

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genomic

Tools for genomic copy-number analysis.

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setup-linux

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us-treasury-rates

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analysis-cmap

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analysis-egfrir

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analysis-hcc-cd133-st

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analysis-lineage-tracing-b1a

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bioc-rnaseq

Analysis and Interpretation of Bulk RNA-Seq Data using Bioconductor

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dot

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exercise-genomics

020

exercise-python

020

exercise-rna-seq

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explained-variance

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gtex

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intro-hmm

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intro-transformer

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jart

Tools for managing jar files

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nixflow

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rt-benchmark

Code to test Rt estimates against synthetic data

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seq-targets

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setup-project

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swl

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tutorial-code-organization

020

tutorial-cpp

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tutorial-python

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u133-array-to-tcga-rnaseq

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