digenoma lab

digenoma lab's repositories

A repository to convert BAM->CRAM files

Language:NextflowMIT100

Fast-SG: An alignment-free algorithm for ultrafast scaffolding graph construction from short or long reads.

Language:C++MIT000

FAST-SG idea implemented using minimizer and chaining with the minimap2 API.

Language:CMIT000

Ultra-fast detection and split of miss-assembled contigs using pair-end reads.

Language:C++MIT000

An accurate and ultra-fast hybrid genome assembler

Language:PerlAGPL-3.0000

Not my work, just a repo for DiscovarDenovo version 51885

Language:C++MIT000

Synthetic Scaffolding Graph construction, Overlaps, Scaffolding, Validation, Gap filling and Polishing

Language:C++AGPL-3.0000

Pipeline to make neonantigen prediction from WGS data

Language:Perl000

Ultrafast consensus module for raw de novo genome assembly of long uncorrected reads

Language:C++MIT000

Toolkit for processing sequences in FASTA/Q formats

Language:CMIT000