dfornika

core-typer

A Core Genome MLST (cgMLST) Typing Tool

illumina-run-simulator

Tool to help test & develop fastq symlinking service

MultiQC

Aggregate results from bioinformatics analyses across many samples into a single report.

routine-sequence-qc

Pipeline for running routine quality control analyses on illumina sequence data

amplify-vite-react-template

My Amplify Gen 2 starter application

auspice

Web app for visualizing pathogen evolution

bioconda-recipes

Conda recipes for the bioconda channel.

chass-queen

Experimenting with (basic) chess engine

cleanup-old

cljs-starter-shadow

clojurescript-devcontainer

database-demo

genomics-qc-site-demo

A demo website for displaying genomics quality control data

genomics-services-api-schemas

illumina-run-monitor

memory-logger

mikrokondo

A simple pipeline for bacterial assembly and quality control

mob-suite

MOB-suite: Software tools for clustering, reconstruction and typing of plasmids from draft assemblies

nf-flu

Influenza genome analysis Nextflow workflow

norovirus-blast-analysis-service

plain-clojure-lambda

Demo of AWS Lambda built with Clojure/ClojureScript

quarto-playground

Repo to learn quarto

react-ag-grid-demo

reviewme

rrna-16s-analysis-service-fastapi

Prototype of a web-based 16S analysis server

sequencing-runs-db

sequencing-runs-service-clj

Clojure implementation of Sequencing Runs Service

spring-boot-service-template

tools-iuc

Tool Shed repositories maintained by the Intergalactic Utilities Commission

witchcraft-scratchpad

Scratchpad for learning the lambdaisland/witchcraft library for controlling Minecraft from Clojure