Liu Hui's repositories
AmyPET
Amyloid imaging to prevent Alzheimer's Disease
anylabeling
Effortless AI-assisted data labeling with AI support from YOLO, Segment Anything, MobileSAM!!
brainmorph
A Foundational Keypoint Model for Robust and Flexible Brain MRI Registration
ChatTTS
ChatTTS is a generative speech model for daily dialogue.
DL-DiReCT
DL+DiReCT - Direct Cortical Thickness Estimation using Deep Learning-based Anatomy Segmentation and Cortex Parcellation
kaapana
Kaapana (from the hawaiian word kaʻāpana, meaning “distributor” or “part”) is an open source toolkit for state of the art platform provisioning in the field of medical data analysis. The applications comprise AI-based workflows and federated learning scenarios with a focus on radiological and radiotherapeutic imaging.
magpylib
Python package for computation of magnetic fields of magnets, currents and moments.
MedSAM
The official repository for MedSAM: Segment Anything in Medical Images.
mercure
mercure DICOM Orchestrator
mercure-totalsegmentator
mercure module for segmentation of 104 classes in CT images.
MITK
The Medical Imaging Interaction Toolkit.
niftyreg
This project contains command line tools to perform rigid, affine and non-linear registration of nifti or analyse images as well as utilities
nnunet_docker
Utilities to run nnUNet more easily using containers
odl
Operator Discretization Library https://odlgroup.github.io/odl/
OMEGA
Open-source MATLAB Emission Tomography Software
orthanc-setup-samples
Sample Orthanc deployments and scripts
pyapetnet
a CNN for anatomy-guided deconvolution and denoising of PET images
pymedphys
A community effort to develop an open standard library for Medical Physics in Python. Building quality transparent software together via peer review and open source distribution. Open code is better science.
SAM-Med3D
SAM-Med3D: An Efficient 3D Model for Promptable Volumetric Medical Image Segmentation
scanhub
ScanHub combines multimodal data acquisition and complex data processing in one cloud platform.
Score-Based-Generative-Models-for-PET-Image-Reconstruction
Official code for Score-Based Generative Models for PET Image Reconstruction (MELBA)
simpet
SimPET is a framework intended to setup and launch PET imaging Monte Carlo simulations on a simple way. It uses popular tools such as SimSET and STIR
SimplePetScanner
A full-body PET scanner using G4 parameterised solid
TMTV-Net
This repository employs a deep-learning method for the automated segmentation of total metabolic tumor volume (TMTV) in whole-body [18]F-FDG PET/CT images, with an emphasis on multi-center generalizability.
TotalSegmentator
Tool for robust segmentation of >100 important anatomical structures in CT images
TriDFusion
TriDFusion (3DF) Medical Imaging Viewer