Adey Feleke Desta's repositories
abricate
:mag_right: :pill: Mass screening of contigs for antimicrobial and virulence genes
courses
Course homepages for some of the courses given at SciLifeLab
hpc-environment-modules
Environment modules for ILRI, Nairobi HPC cluster
knowledgebase
General knowledge for HBC computing
MG-RAST-Tools
Repository of script tools, examples, and contributed code for using the MG-RAST API
microbiome_helper
An assortment of scripts to help process and automate various microbiome and metagenomic bioinformatic tools.
microbiome_urine_fertilizer
It is a study on the microbiota and ARGs of source-separated urine during the process of fertilizer production
scripts
General scripts used in the lab. Almost all of them are in core perl, i.e require no modules that don't already come with a perl installation. These script are currently in use by the Lab, so expect full support. This material is based upon work supported by the National Science Foundation under Grant Number EAR-1035955. Any opinions, findings, and conclusions or recommendations expressed in this material are those of the author(s) and do not necessarily reflect the views of the National Science Foundation.
tutorials
:notebook_with_decorative_cover: Various bioinformatics tutorials