Emanuel Heitlinger's repositories
BatHepatoTransc
Analysis of 3' Tag RNA sequences from Hepatocystis infected Epomophorus labiatus.
AA_Zebra
Multiamplicon analysis of zebra fecal samples
AA_Hyenas_Pakt
Data related to metabarcoding of Hyenas
AA_Eimeria_Genotyping
Genotyping of wild isolates from Eimeria
dotfiles
Emacs customisation
HMHZ_mice_microbiome_JSDM
Analisis of microbiome gut communities in wild house mice from the house mice hybrid zone
phyloseq
phyloseq is a set of classes, wrappers, and tools (in R) to make it easier to import, store, and analyze phylogenetic sequencing data; and to reproducibly share that data and analysis with others. See the phyloseq front page:
MultiAmplicon
Metabarcoding Analysis for Multi-Amplicon Projects
CV
my CV
EimeriaNice
Analyses (figures and table) for presenting smooth stuff on Eimeria (e.g. Bern plenary talk)
NamibiaNanopore
Nanopore (ONT) data analysis for the GRK2046 field course in Namibia
Eimeria_Quant
All the analysis related to the assessment of mice microbiome during Eimeria infection
Eimeria_Lab
from 2016 on
Mouse_Eimeria_Field
Data storage for a parasite in the house mouse hybrid zone
AA_Primer_Evaluation
Analysis of primers from multimarker metabarcoding
AA_Fox_AllMetabarcode
Analysis of Metabarcoding data for fox and raccoon: the full spectrum of diet, microbiomes and parasites
Josi-Wild-OOcyst-DNA
Data and code from Josephine Krüger's ( Jojokr's) BSc thesis
AA_Raccoon
Raccoon Metabarcoding Analysis
Hyena_Meta_Transcriptome
Combining transcriptome and metatranscriptome data from non-ivasive samples of a carnivore
HMHZ_review
Third article out of my PhD
EpiCompete
Epidemiology of competition between pathogen species
power_ResTol_Genetics
Power analysis for resistance and tolerance genetics of house mice (against intracellular parasites: Eimeria spp.).
PhD
All the records generated for the duration of my PhD research
Eimeria_Soay
Metabarcoding of Eimeria spp. in Soay Sheep
Jan2017Exp
infection experiment, longitudinal data, qPCR mainly
taxAnyEukAmp
Taxonomy annotation for any Eukaryote amplicon
Eimeria_sample_inventory
An inventory of samples for Eimeria projects at the Heitlinger group
WolvESpoweR
Power calculations for the WolvES application
RbaseDB
SNP effects based on annotation