denvned / keap

Keap is a heap data structure presenting stable PriorityQueue and stable Keapsort sorting algorithm

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Keap

Build Status Maven Central Apache License 2.0 Repository Size Pure Kotlin

Keap is a heap data structure written in Kotlin similar to binary heap. It maintains separately the queue of elements and the tournament tree atop the queue.

Keap is stable, that is, it keeps initial order of equal elements.

It's faster than binary heap in terms of number of comparisons. For any kind of input (random or ordered) of size n, the heapify procedure requires exactly n - 1 comparisons. Binary heap reaches this number of comparisons only for ordered input. For random input, keap compared to binary heap does approximately 90% less comparisons to heapify, 20% more comparisons to offer[todo], and more than 3 times less comparisons to poll. Though, array-backed keap consumes 2-3 times more memory than array-backed binary heap.

Performance summary of keap and binary heap (both array-backed) is as follows:

Keap average Keap worst case Binary heap average Binary heap worst case
Heapify exactly n - 1 exactly n - 1 Θ(n) Θ(n)
Peek Θ(1) Θ(1) Θ(1) Θ(1)
Poll Θ(log n) Θ(log n) Θ(log n) Θ(log n)
Offer Θ(1) Θ(log n) Θ(1) Θ(log n)
Memory used Θ(n) Θ(n) exactly n exactly n

Here are two applications: keap-based PriorityQueue as a replacement of java.util.PriorityQueue and Keapsort sorting algorithm. Both might be useful in two cases:

  1. stability is a must;
  2. comparing elements is rather heavyweight operation (e.g., it requires a database access).

PriorityQueue

PriorityQueue is a keap-based stable replacement of java.util.PriorityQueue.

Keapsort

Keapsort is a Heapsort with keap used instead of binary heap. Keapsort is a comparison-based sorting algorithm with a worst-case O(n log n) runtime. As keap is a stable priority queue, Keapsort is stable. Unlike Heapsort, Keapsort doesn't have an in-place version.

Like Heapsort, Keapsort produces first output after Θ(n) comparisons. For Keapsort, this Θ(n) estimate is just equal to n - 1. To sort random input completely, Keapsort does almost two times less comparisons than Heapsort, nearly 1% less comparisons than Mergesort and 1-2% more comparisons than Timsort.

Like Heapsort, Keapsort is not a modern CPU-friendly algorithm since it has poor data cache performance.

Like Heapsort, Keapsort doesn't seem to parallelize well.

Benchmarks

JMH Gradle Plugin is used to build and run benchmarks. Benchmark results are obtained on a PC running under Windows 7 with Intel(R) Core(TM) i7-3770 3.4 GHz CPU and 64-bit JRE build 1.8.0_112-b15 with the following java parameters: -Xms1g -Xmx1g. To get results in your environment, run:

./gradlew clean jar jmh

For both java.util.PriorityQueue and keap-based PriorityQueue, there are two types of benchmarks:

  1. Benchmarks examining operations with random elements: heapify (building the queue from a collection), offer, peek, and poll. The queue elements are random strings of length ~30 characters with constant 10-characters prefix. Queue size is 10000.
  2. Benchmarks examining offering ordered elements: offerIncreasing (successively increasing elements) and offerDecreasing (successively decreasing elements). The queue elements are strings of length ~30 characters with constant 10-characters prefix. Queue size is 10000.

Current results grouped for easy review are as follows. Building the queue from collections of random elements:

Benchmark                                   Mode  Cnt   Score   Error   Units
JavaQueueRandomBenchmark.heapify           thrpt   20   1.812 ± 0.041  ops/ms
KeapQueueRandomBenchmark.heapify           thrpt   20   3.315 ± 0.019  ops/ms

Basic queue operations with random elements:

Benchmark                                   Mode  Cnt   Score   Error   Units
JavaQueueRandomBenchmark.offer             thrpt   20   3.652 ± 0.075  ops/us
JavaQueueRandomBenchmark.peek              thrpt   20  81.031 ± 0.488  ops/us
JavaQueueRandomBenchmark.poll              thrpt   20   4.267 ± 0.074  ops/us
KeapQueueRandomBenchmark.offer             thrpt   20   3.349 ± 0.077  ops/us
KeapQueueRandomBenchmark.peek              thrpt   20  82.927 ± 0.484  ops/us
KeapQueueRandomBenchmark.poll              thrpt   20  11.522 ± 0.264  ops/us

Offering ordered elements:

Benchmark                                   Mode  Cnt   Score   Error   Units
JavaQueueOrderedBenchmark.offerDecreasing  thrpt   20   5.506 ± 0.071  ops/us
JavaQueueOrderedBenchmark.offerIncreasing  thrpt   20  31.228 ± 0.363  ops/us
KeapQueueOrderedBenchmark.offerDecreasing  thrpt   20   8.318 ± 0.048  ops/us
KeapQueueOrderedBenchmark.offerIncreasing  thrpt   20   7.539 ± 0.099  ops/us

The scores above are numbers of operations per microsecond, for heapify - per millisecond. So the greater the score, the better performance.

Download

Maven Central

<!-- in Maven project -->
<dependency>
    <groupId>com.github.penemue</groupId>
    <artifactId>keap</artifactId>
    <version>0.1.0</version>
</dependency>
// in Gradle project
dependencies {
    compile 'com.github.penemue:keap:0.1.0'
}

Building from Source

Gradle is used to build, test, and run benchmarks. JDK 1.8 and Kotlin 1.1.1 are required. To build the project, run:

./gradlew

ToDo

  • On increasing capacity, get rid of heapify, thus reducing number of comparisons on offer.

  • Compare Keapsort to Quicksort.

  • Looks like a tree-backed version of keap could be exposed as an immutable/persistent/lock-free heap data structure. In addition, it could support heap merge operation in Θ(1) time.

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Keap is a heap data structure presenting stable PriorityQueue and stable Keapsort sorting algorithm

License:Apache License 2.0


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