deletunde's repositories
open-worm-analysis-toolbox
A testing pipeline that allows us to run a behavioural phenotyping of our virtual worm running the same test statistics the Schafer Lab used on their worm data.
diveintopython3
[Mirror] Dive Into Python 3 online book
intro_programming
A set of IPython notebooks and learning resources for an Introduction to Programming class, focusing on Python.
setup
Reproducible system setup
py4lifesci
Python for the Life Sciences code repository
training-material
A collection of Galaxy-related training material
reproducibility-guide
project page for creating a guide to reproducible research
ipystata
Enables the use of Stata together with Python via Jupyter (IPython) notebooks.
scientific-python-lectures
Lectures on scientific computing with python, as IPython notebooks.
automation-RR-Jupyter
Automation with Jupyter notebooks
organization-RR-Jupyter
Data and project organization for Reproducible Research link to old longer version.
NCBI_Jupyter
A variety of NCBI Computational Tools Distributed as Jupyter Notebooks
NCBIComputationalCookbook
Jupyter notebooks to more effectively leverage computational resources at NCBI.
teach-data-science-UCLA-master-appl-stats
Materials for STATS 418 - Tools in Data Science course taught in the Master of Applied Statistics at UCLA
jupyter-pathway
Canonical pathway visualization and analysis
deep-review
A collaboratively written review paper on deep learning, genomics, and precision medicine
becoming_a_reproducible_scientist
Becoming a reproducible scientist (a minimal tutorial)
py-viz-blog
Code for Pythonic visualization blog post
academicpages.github.io
Github Pages template for academic personal websites, forked from mmistakes/minimal-mistakes
2017-03-15-duke
Reproducible Research with the Jupyter notebook workshop at Duke
awesome-reproducible-research
A collection of awesome resources related to reproducible research and open science
PythonCrashCourse
A quick introduction to Python for Scientists and Engineers
bokeh-notebooks
Interactive Web Plotting with Bokeh in IPython notebook
resume
Python resume generator. From YAML to PDF and static HTML.