Sean's repositories
brite-workshop-R
Instructional materials in basic R programming & a walkthrough of an RNA-seq differential expression analysis
celda-compbiomed
Bayesian Hierarchical Modeling for Clustering Single Cell RNA-Seq Data
feature-viewer
Library to visualize protein sequence features in javascript using D3 - From SIB CALIPHO group; neXtProt project
simple-microarray-analysis
Some examples of simple analyses you can perform on microarray data from the comfort of your own home!
headlessGSEA
Drive the Broad Institute GSEA Application From R
Inkscape-JPEG-export-extension
This is a small extension that allows to export a selection directly in jpeg format from inkscape. Actually this simply create a tmp png and then convert it to jpeg using imagemagick.
PathoScope
Pathoscope: Species identification and strain attribution with unassembled sequencing data
varsome-api-client-python
Example client programs for Saphetor's VarSome annotation API