Santhilal Subhash's repositories
geneSCF_inactive
GeneSCF moved to a dedicated GitHub page, https://github.com/genescf/GeneSCF
rpkm_rnaseq_count
RPKM for RNASeq counts
bio-playground
miscellaneous scripts for bioinformatics/genomics that dont merit their own repo.
ComplexityByStartPosition
Creates a rarefaction curve to measure complexity in RNA Seq data using start position
CheckPhredScale
Check the Phred Scale quality of sequencing files
TransExtract_betaV1.2
Extract Transitions from PARCLIP data. This is beta version, this can be improved by including more description about the results and also with graphical visualization.
decodebiology.github.io
Profile Santhilal Subhash
gganatogram
Create anatograms using ggplot2
interproscan
Automatically exported from code.google.com/p/interproscan
mount_android_ubuntu
Mount your android device on Ubuntu
MultiQC_TestData
Test data for MultiQC. See https://github.com/ewels/MultiQC
QBRC-Somatic-Pipeline
QBRC Somatic Mutation Calling Pipeline
SalmonTools
Useful tools for working with Salmon output
scanpy
Single-Cell Analysis in Python. Scales to >1M cells.
scCATCH
Automatic Annotation on Cell Types of Clusters from Single-Cell RNA Sequencing Data