dcoynel / scilpy_docker

Dockerfile to create a container for the scilus/scilpy library

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scilpy_docker

Dockerfile to create a container for the https://github.com/scilus/scilpy library.

I needed to run scilpy on a HPC cluster, where installing extra libraries as root is not possible.

This container is based on centOS7-python3.8 and should run properly.

To pull the container using singularity: singularity pull docker://dcoynel/python3.8-scilpy

Example command using singularity: singularity run python3.8-scilpy_latest.sif python /opt/app-root/src/scilpy/scripts/scil_apply_bias_field_on_dwi.py -h

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Dockerfile to create a container for the scilus/scilpy library

License:GNU General Public License v3.0


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