db381x

beyond-bar-and-box-plots

Hands–on code to create and style chart alternatives with ggplot2

BICCN_M1_Evo

Analysis for BICCN cross-species primary motor cortex project

Bioinformatics-with-Python-Cookbook-Second-Edition

Bioinformatics with Python Cookbook Second Edition, published by Packt

Bravo_et_al_EyeAntennalDisc

Code for reproducing the figures presented in the manuscript 'Identification of genomic enhancers through spatial integration of single-cell transcriptomics and epigenomics' (Bravo et al., 2020)

BYVSTZP_2020

This repository contains the code for reproducing all the results and figures from the preprint "Isoform specificity in the mouse primary motor cortex".

CCLE_heterogeneity

CellCensusMotorCortex

Resources associated with "A multimodal cell census and atlas of the mammalian primary motor cortex"

cerebellum-atlas-analysis

Code and scripts used in analysis of snRNAseq cerebellar cortex atlas

scRNA_seq_Clk_vs_DANs

scRNA_seq_clock_neurons

Analysis of scRNA_seq of Drosophila clock neurons in LD and DD conditions around the clock

complexheatmap

http://www.bioinformatics-made-simple.com/2018/04/how-to-make-heatmap-with-multiple.html

DataScience

Data Science in Julia course for JuliaAcademy.com, taught by Huda Nassar

machine-learning

mini-atlas

Phenotypic variation of transcriptomic cell types in mouse motor cortex

oneliners

Useful bash one-liners for bioinformatics.

pytorch-Deep-Learning

Deep Learning (with PyTorch)

SARS-CoV-2_Ferret_BAL

sc_mixology

This contains the dataset for comparing scRNA-seq analysis methods

singlecellRNA_melanoma_paper

stat_rethinking_2022

Statistical Rethinking course winter 2022

Taiji

All-in-one analysis pipeline

vsn-pipelines

A repository of pipelines for single-cell data in Nextflow DSL2