davidroad's starred repositories

rtdl-num-embeddings

(NeurIPS 2022) On Embeddings for Numerical Features in Tabular Deep Learning

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UCE

UCE is a zero-shot foundation model for single-cell gene expression data

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AutoGPT

AutoGPT is the vision of accessible AI for everyone, to use and to build on. Our mission is to provide the tools, so that you can focus on what matters.

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JAE

Single cell joint embedding and modality prediction with autoencoder

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CellOracle

This is the alpha version of the CellOracle package

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liana

LIANA: a LIgand-receptor ANalysis frAmework

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pytorch_ehr

source codes based on PyTorch to analyze EHR

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introme

Introme prioritises coding and noncoding splice-altering variants for clinical variant interpretation

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UK_Biobank_GWAS

Overview of the data QC, code, and GWAS summary output from the 2017 UK Biobank data release

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GWA_tutorial

A comprehensive tutorial about GWAS and PRS

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contrastive

Contrastive PCA

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deCS

deCS

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iMAP

A novel unsupervised batch removal framework, called iMAP, based on neural networks.

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Intro-to-ChIPseq

Intro to ChIPseq using HPC

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ib_insync

Python sync/async framework for Interactive Brokers API

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Brain_genomic_data

Brain-related -omics data

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integrative

Software Pipeline for Integrative Genetic Association Analysis: Probabilistic Assessment of Enrichment and Colocalization

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ACTIONet

ACTIONet single-cell analysis framework

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master

A machine learning course using Python, Jupyter Notebooks, and OpenML

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