ISI

Code for ISI image acquisition, stimulus presentation, and mouse visual area segmentation.

![Alt text](NP-P160101A Fig 4.png?raw=true "Figure 4 from Juavinett, Nauhaus, Garrett & Callaway 2016")

Imager & Stimulator Programs

Imager.zip contains files for image acquisition, written by Dario Ringach and Ian Nauhaus. Stimulator.zip contains files for running a visual stimulus during data acquisition.

For complete documentation on installing and using this code, see https://sites.google.com/site/iannauhaus/home/matlab-code

Visual Area Segmentation

At the command line, use "getAreaBorders." Add the other files to your path for complete usage.

About

For more information, see Juavinett, Nauhaus, Garrett, Zhuang, & Callaway (2017) Automated identification of mouse visual areas with intrinsic signal imaging. Nature Protocols. http://www.nature.com/nprot/journal/v12/n1/abs/nprot.2016.158.html

About

Code for ISI image acquisition, stimulus presentation, and mouse visual area segmentation.

Languages

Language:MATLAB 90.5%Language:M 7.1%Language:C 1.2%Language:Mathematica 1.1%Language:Objective-C 0.1%