David Brann's repositories
CompClub-sklearn
Intro to sklearn for Comp Club
full-FORCE-demos
Simulations illustrating the results of full-FORCE.
BGI_vs_Illumina_Benchmark
This repository contains code related to the publication "Comparative performance of the BGI and Illumina sequencing technology for single-cell RNA-sequencing" by Senabouth et al.
FeatureSelectionGA
Feature Selection using Genetic Algorithm (DEAP Framework)
jackstraw
implements jackstraw methods in python test for associations between variables and systematic modes of variation discovered in the data.
kb_python
A wrapper for the kallisto | bustools workflow for single-cell RNA-seq pre-processing
PulseBoy
GUI tool for controlling NI pulse trains
pyGenomeTracks
python module to plot beautiful and highly customizable genome browser tracks
SBA-PPP-Loan-Data
SBA Paycheck Protection Program Loan Level Data from https://home.treasury.gov/policy-issues/cares-act/assistance-for-small-businesses/sba-paycheck-protection-program-loan-level-data
starfish
starfish: unified pipelines for image-based transcriptomics
suite2p
cell detection in calcium imaging recordings