davidebolo1993

Davide Bolognini's repositories

VISOR

VarIant SimulatOR for short, long and linked reads

Language:PythonLGPL-3.041 1 36

NanoR

Nanopore data analysis in R

Language:RLGPL-3.038 3 23

TRiCoLOR

Tandem Repeats Caller for LOng Reads

Language:PythonLGPL-3.016 2 15

cosigt

Language:Python5 10

EViNCe

EValuation of Nanopore (SV) Callers

Language:PythonGPL-3.05 10

smk_sc_lr

Snakemake pipeline for single-cell long-read sequencing

Language:ShellGPL-3.0400

Classes

Teaching material for genomic classes

100

davidebolo1993

GPL-3.0100

davidebolo1993.github.io

Language:HTML100

prs_pipeline

PRS pipeline

Language:R100

TREADMILL

Tandem REpeats AnD MethylatIon caLLing

Language:Python100

wf-single-cell

Language:PythonNOASSERTION100

nanordoc

Language:HTML010

cosigtdoc

Language:ShellGPL-3.0000

haploid_assembly_smk

Snakemake pipeline for assembly of haploid genomes

Language:PythonGPL-3.0000

prepare_4dorado

Fast preprocessing of sequencing summary files from nanopore - split into channel-specific tables for downstream parallel execution of dorado duplex

Language:Go000

smk_sc_lr_doc

Language:ShellGPL-3.0010

snakemake_template

template for pipelines in snakemake

GPL-3.0010

treadmilldoc

Language:HTML000

tricolordoc

Language:HTML010

visordoc

Language:HTML000

vuepress_doc_template

Language:ShellGPL-3.0010