darrenjw

fp-ssc-course

An introduction to functional programming for scalable statistical computing

logreg

Bayesian inference for a logistic regression model in various languages

blog

Code samples associated with my blog posts

smfsb

Documentation, models and code relating to the 3rd edition of the textbook Stochastic Modelling for Systems Biology

scala-glm

Scala library for fitting linear and generalised linear statistical models

djwhacks

Test repo for sharing code snippets and learning about git

scala-smfsb

Scala library for biochemical network simulation, associated with the 3rd edition of the textbook Stochastic Modelling for Systems Biology

fps-course

Category theory for pure functional programming in Scala - materials for course participants

isba2021

Material relating to my ISBA 2021 presentation

unbiased-mcmc

Unbiased MCMC with couplings

code-examples

Some simple coding examples

sbml-sh

SBML-shorthand - a concise notation for Systems Biology models targeting SBML

BWK

Code from Boys, Wilkinson and Kirkwood (2008)

python-smfsb

Python library for the book, Stochastic modelling for systems biology, third edition

breeze.g8

SBT Template for Scala + Breeze

FPNEM-2020-05

Materials for the (online) May 2020 FP North East Meetup

sv

C Library for Bayesian MCMC fitting of (factor) stochastic volatility models

talks

Supporting information for talks

Category_Theory_Machine_Learning

FPNEM-2020-07

Materials for "An evening of Scala" at the FPNE Meetup for July 2020

fps.g8

Sbt giter8 template for functional programming in Scala with Cats and other Typelevel libraries

gdagsim

GDAGsim - library for (conditional) simulation of Gaussian DAG models

MGnifyR

R package for searching, downloading and analysis of EBI MGnify metagenomics data

milewski-ctfp-pdf

Bartosz Milewski's 'Category Theory for Programmers' unofficial PDF and LaTeX source

scala-glm.g8

Giter8 template for the scala-glm library

scala-smfsb.g8

Scala Sbt Giter8 template for scala-smfsb projects

sjs.g8

Scala.JS giter8 template

smile

Statistical Machine Intelligence & Learning Engine

sn.g8

Scala native giter8 template

uo-stream

Streaming Kriging for real time air pollution mapping