Daniel Gomez (dangom)

dangom

Geek Repo

Location:Cambridge, MA

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Donders-Institute

Daniel Gomez's repositories

mr-sequence-diagrams

Draw MR Sequence Diagrams for LaTeX / MetaPost

scimax-layer

Attempt to bring some of Scimax' functionality to Spacemacs

fslx

A simple and intuitive wrapper for FSL tools.

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tfm

Compute temporal functional modes (or atlas based temporal ICA) from functional MRI data.

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awesome-python

A curated list of awesome Python frameworks, libraries, software and resources

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dataviz

A book covering the fundamentals of data visualization.

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emacs.d

My emacs config files.

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.emacs.d

My emacs configuration

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ANTs

Advanced Normalization Tools (ANTs)

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confound_prediction

Confound-isolating cross-validation approach to control for a confounding effect in a predictive model.

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emacs

Mirror of GNU Emacs

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ess-smart-equals

Better smart-assignment with = in R and S, with no underscores.

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fmriprep

fMRIprep is a functional magnetic resonance image pre-processing pipeline that is designed to provide an easily accessible, state-of-the-art interface that is robust to differences in scan acquisition protocols and that requires minimal user input, while providing easily interpretable and comprehensive error and output reporting.

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ihMTRAGE-optimize

Matlab code for simulation of ihMT experiment using MPRAGE like sequence

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MP2RAGE-related-scripts

MP2RAGE Scripts - T1 map correction & Background noise removal

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niworkflows

Common workflows for MRI (anatomical, functional, diffusion, etc)

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org-roam

Rudimentary Roam replica with Org-mode

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rapidtide

rapidtide - a suite of programs for doing time lag correlation analysis on fMRI data

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repository

This does everything that I need. Layering, smoothing-within layers, layer-connectivity, RF-coil,combination, 2D-dridding of layers and columns, preprocessing, BOLD correction of VASO, motion correction, layering etc. Mostly C++ with a bit of Matlab here and there.

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sfs

Signal Fluctuation Sensitivity

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smriprep

Structural MRI PREProcessing (sMRIPrep) workflows for NIPreps (NeuroImaging PREProcessing tools)

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spacemacs-theme

Light and dark theme for spacemacs that supports GUI and terminal

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spm-docker

Dockerfile for SPM

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spotify.el

Control the Spotify app from within Emacs.

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VAN_DataSets

This project contains micro-Vascular Anatomical Network Data Sets from a consortium of research groups working to develop automated methods to analyze cerebral microvascular networks.

vasculature

Region- and voxel-based probabilistic mapping of whole-brain veins and arteries (densities and diameter) in the MNI space

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vfa-fleet

Supplementary materials for VFA-FLEET manuscript

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what-is-this-face-called

Find out the name of the face at point.

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