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Damilola Oresegun (damioresegun)

damioresegun

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Damilola Oresegun's starred repositories

nanoseq

Nanopore demultiplexing, QC and alignment pipeline

Language:NextflowLicense:MITStargazers:153Issues:0Issues:0

lets-plot

Multiplatform plotting library based on the Grammar of Graphics

Language:KotlinLicense:MITStargazers:1501Issues:0Issues:0

patterns

A curated collection of Nextflow implementation patterns

Language:NextflowLicense:MITStargazers:320Issues:0Issues:0

awesome-nextflow

A curated list of nextflow based pipelines

License:CC0-1.0Stargazers:558Issues:0Issues:0

nextflow_cheatsheet

Tips for Nextflow and cheatsheet for channel operation

License:MITStargazers:64Issues:0Issues:0

Porechop_ABI

Adapter trimmer for Oxford Nanopore reads using ab initio method

Language:C++License:GPL-3.0Stargazers:33Issues:0Issues:0

bioinformatics_curriculum

Some ideas on things to learn to get started with bioinformatics

License:MITStargazers:16Issues:0Issues:0

markdown-here

Google Chrome, Firefox, and Thunderbird extension that lets you write email in Markdown and render it before sending.

Language:JavaScriptLicense:MITStargazers:59569Issues:0Issues:0

Awesome-Bioinformatics

A curated list of awesome Bioinformatics libraries and software.

Stargazers:2986Issues:0Issues:0

Long-read-assembler-comparison

Benchmarking of long-read assembly tools for bacterial whole genomes

Language:PythonLicense:CC-BY-4.0Stargazers:167Issues:0Issues:0

sga

de novo sequence assembler using string graphs

Language:C++Stargazers:237Issues:0Issues:0

2019-05-02-standrews

Website for Software Carpentry workshop at University of St Andrews on 2nd-3rd May 2019

Language:HTMLLicense:NOASSERTIONStargazers:1Issues:0Issues:0

2019-05-30-standrews

Website for Software Carpentry workshop at University of St Andrews on 30th-31st May 2019

Language:HTMLLicense:NOASSERTIONStargazers:1Issues:0Issues:0

any2fasta

Convert various sequence formats to FASTA

Language:PerlLicense:GPL-3.0Stargazers:124Issues:0Issues:0

guppy_bcsplit

Split output of Oxford Nanopore's Guppy basecaller output according to barcodes found in sequences

Language:PythonLicense:GPL-3.0Stargazers:7Issues:0Issues:0

ont_fast5_api

Oxford Nanopore Technologies fast5 API software

Language:PythonLicense:NOASSERTIONStargazers:143Issues:0Issues:0

denbi-nanopore-training

de.NBI Nanopore Training Course

Stargazers:17Issues:0Issues:0

nanolyse

Remove lambda phage reads from a fastq file

Language:PythonLicense:GPL-3.0Stargazers:27Issues:0Issues:0

wtdbg2

Redbean: A fuzzy Bruijn graph approach to long noisy reads assembly

Language:CLicense:GPL-3.0Stargazers:497Issues:0Issues:0

TeXstudio_Solarized

Solarized theme for TeXstudio

License:MITStargazers:196Issues:0Issues:0

nanofilt

Filtering and trimming of long read sequencing data

Language:PythonLicense:GPL-3.0Stargazers:184Issues:0Issues:0

NanoPlot

Plotting scripts for long read sequencing data

Language:PythonLicense:MITStargazers:400Issues:0Issues:0

nanoQC

Quality control tools for nanopore sequencing data

Language:PythonLicense:GPL-3.0Stargazers:88Issues:0Issues:0

poretools

a toolkit for working with Oxford nanopore data

Language:Jupyter NotebookLicense:MITStargazers:239Issues:0Issues:0

onedrive

OneDrive Client for Linux

Language:DLicense:GPL-3.0Stargazers:9586Issues:0Issues:0