dakota-palmer's repositories
DeepLabCut
Markerless pose estimation of user-defined features with deep learning for all animals, including humans
FP-analysis
DP's MATLAB, Python, & R code workflow for fiber photometry analysis (Palmer et al 2023 paper)
FPA
Fiber photometry analysis
fpExplorer
Fiber Photometry Analysis Tool
MEDPC-Python-behavior-analysis
Python code used to import, tidy, and analyze MEDPC behavioral data in Python.
medpc2excel
medpc2excel is a Python package for convert single or multiple medpc data file into Excels.
medpc_preprocessing
A collection of python scripts for vizualizing, cleaning, and organizing raw data files from Med Associates (MED-PC)
Opto-analysis-MATLAB
Optogenetics analysis pipeline developed from Christelle Cayton's code for Jocelyn Richard’s Lab at the University of Minnesota. Used for analyses including those reported in Palmer et al., 2023.
Palmer-et-al-2023-VP-VTA-manuscript-stats
Data and R analysis code from Palmer et al 2023 manuscript
GuPPy
Guided Photometry Analysis in Python, a free and open-source FP analysis tool.
PulsePal
Open source pulse train generator