dabrze's repositories
CheckMyBlob
Machine learning experiments for CheckMyBlob
imbalanced-stream-generator
MOA compatible imbalanced data stream generator, as described in "The impact of data difficulty factors on classification of imbalanced and concept drifting data streams".
confidence-planner
A Python library for estimating confidence intervals around accuracy and sample sizes for classification experiments.
swirl_courses
A collection of interactive courses for the swirl R package in Polish.
tetrahedron
R code for classifier performance and interestingness measure visualization in 3D barycentric space.
cbb_reproducibility
Repo for CBB seminar on reproducibility
measure_dynamics
Code and scripts accompanying the paper: "On the Dynamics of Classification Measures for Imbalanced Data"
pdb-primary-citation-pdf-extractor
A Python package to download full article PDFs from OA publications
pdb_structure_quality
Reproducible PDB analysis accompanying the paper "On the evolution of the quality of crystallographic models in the PDB".
topsis-msd-improvement-actions
A Python library for creating TOPSIS rankings and visualizing the alternatives in WMSD for interpretation and designing improvement actions
cmb_server_validation
Validation result and clustering code for the CheckMyBlob web server
cryo-em-ligand-cutter
Code for extracting ligand fragments from cryo-EM difference maps.
genedisco-starter
The starter repository for submissions to the GeneDisco challenge for optimized experimental design in genetic perturbation experiments.
imbalanced-learn
Python module to perform under sampling and over sampling with various techniques.
moa
MOA is an open source framework for Big Data stream mining. It includes a collection of machine learning algorithms (classification, regression, clustering, outlier detection, concept drift detection and recommender systems) and tools for evaluation.
restraintlib-feedstock
A conda-smithy repository for restraintlib.
subsecting_rfe
Python implementation of the k-Subsecting Recursive Feature Elimination algorithm
sugar_conformation
Reproducible CSD analysis accompanying the paper "Conformation-dependent restraints for polynucleotides: The sugar moiety."