daaaaande's repositories
auto_find_circ
automating find_circ
circs_snake
snakemake workflow of circs : circRNA detection from RNASeq
automate_DCC
automating DCC
bionanotator
bionano annovar annotation
CIRCexplorer
A combined strategy to identify circular RNAs (circRNAs and ciRNAs) (Zhang et al., Complementary Sequence-Mediated Exon Circularization, Cell (2014), 159:134-147)
circexplorer1_auto
automating circexplorer1
CIRCexplorer2
circular RNA analysis toolset
CirComPara
:microscope: A multi-method comparative bioinformatics pipeline to detect and study circRNAs from RNA-seq data
DCC
DCC uses output from the STAR read mapper to systematically detect back-splice junctions in next-generation sequencing data. DCC applies a series of filters and integrates data across replicate sets to arrive at a precise list of circRNA candidates.
find_circ
tools to find circRNAs in RNA-seq data
FUCHS
FUCHS - FUll circle CHaracterization from rna-Seq
TCC-GUI
📊 Graphical User Interface for TCC package