Daniel Straub's starred repositories

rnaseq

RNA sequencing analysis pipeline using STAR, RSEM, HISAT2 or Salmon with gene/isoform counts and extensive quality control.

Language:NextflowLicense:MITStargazers:878Issues:150Issues:644

mag

Assembly and binning of metagenomes

Language:NextflowLicense:MITStargazers:209Issues:153Issues:279

ampliseq

Amplicon sequencing analysis workflow using DADA2 and QIIME2

Language:NextflowLicense:MITStargazers:182Issues:144Issues:340