Daniel Straub's repositories
functionalmetagenomics
Assembly-free functional metagenomics pipeline with KneadData and HUMAnN3
Language:NextflowMIT000
nf-core-configs
Config files used to define parameters specific to compute environments at different Institutions
Language:NextflowMIT000
nf-core-readsimulator
A pipeline to simulate sequencing reads, such as Amplicon, Target Capture, Metagenome, and Whole genome data.
Language:NextflowMIT000
test-datasets
Test data to be used for automated testing with the nf-core pipelines
vm-playbooks
Ansible playbooks for QIIME 2 environments