D3b (d3b-center)

D3b

d3b-center

Geek Repo

Center for Data Driven Discovery in Biomedicine at the Children's Hospital of Philadelphia

Location:Philadelphia, PA

Home Page:d3b.center

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D3b's repositories

d3b_bic-seq2

CWL Implementation based on this tool http://compbio.med.harvard.edu/BIC-seq/ and this cluster implementation : https://github.com/ding-lab/BICSEQ2

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novoBreak_sv_analysis

workflow for SV analysis using the tool novoBreak

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FusionAnnotator

FusionAnnotator source code

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canvas_cnv

Workflow to run cnv caller from Illumina, https://github.com/Illumina/canvas

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pedcbioportal

cBioPortal for Cancer Genomics

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legacy-cbioportal-frontend

React Frontend of cBioPortal :tada:

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kfdrc_sanger_tools

Sanger tools ported over from https://github.com/genome and https://github.com/cancerit

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diseaseXpress-pipeline

pipeline to process diseaseXpress datasets

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codex2

CWL Implementation of exome CNV caller https://github.com/yuchaojiang/CODEX2

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LinkedSV

CWL Implementation of WG Lab long read structural variant caller

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bixanalysis

Tracking analysis & informatics Requests

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