CyVerse UK's repositories
Documentation
Wiki of CyVerseUK project. Tutorials and overview of technologies.
polymarker
Dockerized Agave app for Polymarker, a SNP assay development pipeline
cyverseuk-util
A collection of scripts for the cyverse UK clusters
cyverseone
OpenNebula web api to instantiate services from CyVerse UK infrastructure
000
emblebi-ena-submit
Docker build to submit to the EMBL-EBI ENA
Retrieve_BIP_Phenotypes
Docker container for retrieveing Phenotypic data from the Brassica Information Portal. It uses the BIP-API, stores output in .csv-format and passes the Sequence IDs on into a .txt file for further queries.
Trimmomatic
docker image and Agave app for Trimmomatic software