Kevin Lee's repositories
ref-guided-assembly-pipeline
Adapting the pipeline described in Lischer & Schmizu (2017, doi:10.1186/s12859-017-1911-6) for my own use.
cyklee.github.io
Jekyll-powered user page
DATA_SCIENTIST_Movie_recommendations
This project is part of the Openclassrooms DataScientist Curriculum together with CentraleSupélec
datasharing
The Leek group guide to data sharing
dotfiles
Dotfiles and an install script for easy set up
eASV-pipeline-for-515Y-926R
This is a collection of scripts for analyzing mixed 16S/18S amplicon sequences using tools such as qiime2, DADA2, deblur, and bbtools
echonetlite_homeassistant
A Home Assistant custom component for use with ECHONET enabled Mitsubishi HVAC systems.
fastq2biom
Z shell script automating steps processing Illumina paired-end FASTQ to a BIOM format.
Huntaxa
Search for specified taxa above a specified relative abundance among microbiome studies
microbiome_helper
A repository of bioinformatic scripts, SOPs, and tutorials for analyzing microbiome data.
MSc-thermophilic-Armatimonadetes
.RMD files for MSc thesis
r-yaml
R package for converting objects to and from YAML
snakemake_workshop
Snakemake workshop
STOTEN_FEAST
Cross biome soil-atmosphere source tracking with FEAST