Onuralp's repositories
chatGPT-for-genetics
Chat with Open Targets genetics database leveraging text-to-graphQL capabilities of OpenAI Codex.
dream2022-noisy-chardonnay
DREAM2022 competition for predicting promoter expression from DNA sequence.
llm-for-clinical-variants
Data repository for NeurIPS 2022 LMRL workshop paper.
icml-human-genetics
Data repository for ICML 2022 CompBio workshop paper.
mech-interpretability
Exploring length generalization in the context of indirect object identification (IOI) task for mechanistic interpretability.
nejm-image-challenge
NEJM Image Challenge dataset and experiments
neurips-llm-efficiency
My submission for NeurIPS 2023 LLM Efficiency Challenge.
ntia-open-weights
Comments on the NTIA Open Weights RFC
chatgpt-retrieval-plugin
The ChatGPT Retrieval Plugin lets you easily search and find personal or work documents by asking questions in everyday language.
evals
Evals is a framework for evaluating OpenAI models and an open-source registry of benchmarks.
gexpfoundation_hackathon
Code repository for our submission at BioxML hackathon, team LLM
observed-antibody-space
Query Observed Antibody Space (OAS) database for downstream language modeling tasks.
quant_gen
Useful functions for quantitative genetics analysis
lit-gpt
Hackable implementation of state-of-the-art open-source LLMs based on nanoGPT. Supports flash attention, 4-bit and 8-bit quantization, LoRA and LLaMA-Adapter fine-tuning, pre-training. Apache 2.0-licensed.
ml-engineering
Machine Learning Engineering Guides and Tools
touch-the-grass
Mood companion using location history and LLM-powered description of photos