cwbeitel

kubeflow-rl

Demonstrations of RL on kubeflow

tracer

Tracer is a codebase for prototyping the use of a deep LSTM model for translating SMRT sequencing traces to DNA string sequences (or "base calling").

lxy

Genome scaffolding and phasing with Hi-C using a genetic algorithm approach.

pcompile

A prototype framework for expressing automated laboratory protocols originally targeting the Transcriptic API

tk

agents

Efficient Batched Reinforcement Learning in TensorFlow

build-notes

ds

A merry journey through various data structures in Golang.

iqtk

The Inquiry Toolkit is a full stack of open-source data infrastructure components for reproducible scientific research.

proxmine

Code supporting Beitel et al. (2014) regarding strain- and plasmid-level metagenome deconvolution using high-throughput chromosome conformation capture.

cwbeitel.github.io

blog

examples

A repository to host extended examples and tutorials

jax-md

Differentiable, Hardware Accelerated, Molecular Dynamics

k8s

Tools for ML/Tensorflow on Kubernetes.

kubeflow

Machine Learning Toolkit for Kubernetes

kubeflow-rl-1

Repository for working with Kubeflow and RL

projectclarify

Bringing artificial intelligence to bear on the improvement of human cognitive skills

tensor2tensor

Library of deep learning models and datasets designed to make deep learning more accessible and accelerate ML research.