cth

banpipe

BANpipe is logic-based pipeline programming language

sdcg

Stochastic Definite Clause Grammars

QsubCmds.jl

Run Julia external (shell) commands on a HPC cluster

grspwr

power calculator for Genetic Risk Scores (GRS)

assemble-yourself

cut and paste bioinformatics -- literally

imputation_scripts

simplenn

A simplistic neural network library with support for backpropagation training

vcf-misc-tools

Another set of tools working with VCF files.

wunderbar

Identify mislabeled samples in genotype data

BGZFStreams.jl

BGZF Stream

ClusterManagers.jl

cth

cthmisc.jl

DataStructures.jl

Julia implementation of Data structures

GLM.jl

Generalized linear models in Julia

ImputationQualityScores.jl

Quality metrics for evaluation of genotype imputations

impute-power

Calculation of statistical power in imputed genotypes

julia

The Julia Language: A fresh approach to technical computing.

Julog.jl

Experimenting with probabilistic extensions to a Julog

merge-imputations

METADATA.jl

Metadata for registered Julia packages.

pimatch

PlinkPlumber.jl

Plumbing to integrate the use of plink and similar tools in Julia

PLP2017-submission

PLP2017-submission

qqman

R code for creating Manhattan plots and Q-Q plots for GWAS

R_Functions

rvtests

Rare variant test software for next generation sequencing data

stable-match

Stable matching of cases and controls

vcftools

A set of tools written in Perl and C++ for working with VCF files, such as those generated by the 1000 Genomes Project.

YTables.jl

Markup and markdown formatting for Julia DataFrames