C. Titus Brown (ctb)

ctb

Geek Repo

Company:University of California, Davis

Location:Davis, CA

Home Page:http://ivory.idyll.org/blog/

Twitter:@ctitusbrown

Github PK Tool:Github PK Tool


Organizations
beacon-center
dib-lab
EarthMicrobiomeProject
everpub
ngs-docs
osfclient
spacegraphcats
speeding-up-science-workshops
ucdavisdatalab

C. Titus Brown's starred repositories

cpython

The Python programming language

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Ghost

Independent technology for modern publishing, memberships, subscriptions and newsletters.

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datasketch

MinHash, LSH, LSH Forest, Weighted MinHash, HyperLogLog, HyperLogLog++, LSH Ensemble and HNSW

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ReScience

The ReScience journal. Reproducible Science is Good. Replicated Science is better.

sourmash

Quickly search, compare, and analyze genomic and metagenomic data sets.

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sphinx-gallery

Sphinx extension for automatic generation of an example gallery

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GitXiv

GitXiv - Collaborative Open Computer Science.

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advanced-swc

Intermediate and Advanced Software Carpentry tutorial material

adage

Data and code related to the paper "ADAGE-Based Integration of Publicly Available Pseudomonas aeruginosa..." Jie Tan, et al · mSystems · 2016

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Annocript

Annocript is a pipeline for the annotation of de-novo generated transcriptomes. It executes BLAST analysis with UniProt, NCBI Conserved Domain Database and Nucleotide divisions, Gene Ontology, UniPathways and the Enzyme Commission. It gives information about the longest ORF (using DNA2PEP) and non-coding potential of the sequences (using Portrait). A final heuristic makes Annocript able to identify putative long non-coding RNAs among your transcripts. Like our facebook page to be always updated: https://www.facebook.com/annocript

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open-science-with-R

⛔️ [SUSPENDED] Writing the rOpenSci book on GitHub

DAPS

Denoising Autoencoders for Phenotype Stratification

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theproj

Test project for software carpentry

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pyblue-central

Static website generator for sciencey people

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mmgenome

Please use mmgenome2 instead. Tools for extracting individual genomes from metagenomes

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meep

Meep! A simple messageboard implementation for a class.

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NeatFreq

NeatFreq/Automaton Reference-Free Coverage Reduction Distribution Package

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2012-paper-diginorm

Paper source, analysis notebook, and data generation/analysis scripts for diginorm paper

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cse891-fall-2011-jw

practice for putting things in repository

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cse891-fall-2011-jw

practice for putting things in repository

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khmer

in-memory k-mer counting

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