csweaver / pySolo-Video

pySolo video extension

README

pySolo-Video is a standalone program that provides video tracking capabilities meant for studying sleep in Drosophila

Input can be:

• usb camera handled through opencv
• single movie files (mov, avi, etc)
• folders containing sequences of snapshots

Tracking is done using findContours algorithm of opencv.

It works through a GUI interface

REQUIRES:

• python 2.x
• wxpython 2.8
• opencv
• numpy
• pyserial

TODO

Saving mask file from pvg_standalone results in error

sult in an elementwise object comparison in the future.
if self.referencePoints == None:
Traceback (most recent call last):
File "/Users/chenn/Documents/GitHub/pySolo-Video/pvg_common.py", line 500, in onKeyPressed
self.ACTIONS[key][0]()
File "/Users/chenn/Documents/GitHub/pySolo-Video/pvg_common.py", line 574, in SaveMask
self.mon.saveROIS()
File "/Users/chenn/Documents/GitHub/pySolo-Video/pysolovideo.py", line 1624, in saveROIS
self.mask.saveROIS( filename, self.cam.getSerialNumber() )
File "/Users/chenn/Documents/GitHub/pySolo-Video/pysolovideo.py", line 860, in saveROIS
json.dumps({self.ROIS, self.points_to_track, self.referencePoints, self.serial},cf)
TypeError: unhashable type: 'numpy.ndarray'