csoneson

ARMOR

Light-weight Snakemake workflow for preprocessing and statistical analysis of RNA-seq data

ExploreModelMatrix

Explore design matrices interactively with R/Shiny

alevinQC

Create QC and summary reports for Alevin output

countsimQC

countsimQC - Compare characteristic features of count data sets

treeclimbR

iCOBRA

Interactive benchmarking of ranking and assignment methods

compcodeR

dreval

Convenience functions to evaluate reduced dimension representations in SingleCellExperiment objects

jcc

R package to calculate junction coverage compatibility (JCC) scores

DuoClustering2018

R package with data sets and clustering results from Duò et al (F1000Research 2018)

ConfoundingExplorer

TabulaMurisData

Access data from Tabula Muris Consortium via R/Bioconductor

BiocBuildFailureDiagnosis

docker-exploremodelmatrix

bioc-actions

GitHub Actions for developing and maintaining Bioconductor packages

bioc_pkg_licenses

CSAMA_website

Website for CSAMA

csoneson.github.io

dms-viz.github.io

Interactive tool for visualizing site-level data on a protein structure

faim-ipa

Package to organize high content screening experiments.

greeks

Sensitivities of Prices of Financial Options and Implied Volatilites

ipa-project-template

Copier template for image processing & analysis projects.

isee-lab-csama2024

Koverage

Quickly get coverage statistics given reads and an assembly

mousebreedeR

Score-based mouse breeding scheme adviser

scimap

Spatial Single-Cell Analysis Toolkit

sketchR_package_list

templateDockerShinyPkg

test_biocmanager

velociraptor_package_list

Generate package list for velociraptor