Beast code in Giters

Christian Schudoma's repositories

gff_quantifier

Language:PythonMIT300

eggnog-mapper

Fast genome-wide functional annotation through orthology assignment

Language:PythonAGPL-3.0100

vortex_knight

Language:RMIT100

bioconda-recipes

Conda recipes for the bioconda channel.

Language:ShellMIT000

biodb_id_mapper

Language:PythonMIT000

cazymo

Language:PythonMIT000

container-forge

Language:RoffMIT000

duk_singularity

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eggnog_annotation

Language:NextflowMIT000

eggnog_burst

Language:Python000

gq_flow

Language:NextflowMIT000

gqlib

Language:PythonMIT000

hisat2

Graph-based alignment (Hierarchical Graph FM index)

GPL-3.0000

MAPseq

highthroughput rRNA sequence classification and OTU mapping for metagenomic samples

Language:CNOASSERTION000

medi

Metagenomic Estimation of Dietary Intake and Content.

Language:RApache-2.0000

metaphlow

Language:NextflowMIT000

metatrec

Language:NextflowMIT000

mTAGs

GPL-3.0000

nevermore

Language:NextflowMIT000

nevermore_lib

Language:Nextflow000

nf-batch-controller

Language:Shell000

phagcn_singularity

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profile_me_ci

Language:SingularityGPL-3.0000

protoflow

Language:NextflowMIT000

quantispire

Language:NextflowMIT000

samestr

SameStr identifies shared strains between pairs of metagenomic samples based on the similarity of SNV profiles.

Language:PythonAGPL-3.0000

serpapi-gscraper

Language:Python000

taxcheck

Language:Python000

vknight-docker

Language:DockerfileMIT000

vknight_lib

Language:Nextflow000