Beast code in Giters

Myers Lab's repositories

barseq_counter

A simple tool for demultiplexing barcode sequencing experiments.

Language:Python2 60

BridGE-Python

BridGE: a pathway-based analysis tool for detecting genetic interactions from GWAS

Language:PythonNOASSERTION200

C.albicans-ml-pipeline

Pipeline of building a machine learning model to identify C. albicans gene essentiality

Language:PythonMIT2 60

ae-norm

Autoencoder normalization of the DepMap

Language:R1 70

BEAN-counter

Language:PythonNOASSERTION100

CG-TARGET

Language:RNOASSERTION1 100

CSBIO-Website

Language:HTML1 80

SGA_Public

Compute genetic interactions from SGA output of colony sizes in yeast.

Language:MATLAB1 7 2

VS-SVM

Improving Measures of Chemical Structural Similarity Using Machine Learning on Chemical-Genetic Interactions

Language:MATLAB1 20

C.albicans_in_vitro_pipeline

Functional genomic analysis of genes important for Candida albicans fitness in diverse environmental conditions

Language:Jupyter NotebookMIT050

camoco-cob-maize-demo

Language:Python020

cluster_innerproduct

A patch for Cluster3.0 (1.50) to add a "raw inner product" similarity option

MIT040

FLEX

Functional Evaluation of Experimental Perturbations

MIT080

FLEX_R

FunctionaL Evaluation of eXperimental perturbation (i.e. genome wide knockout) screens

Language:RGPL-3.0010

Mendalert

A cronable script which check to see if new papers were added to a mendaley group. Emails a list if new papers are available.

Language:PerlMIT040

orthrus

Language:RMIT010

BridGE

Language:MATLAB000

C.albicansDataHub

Language:Mathematica000

CamocoHelixInstall

Language:Shell03 1

prototroph_scoring

Supplemental Code

Language:MatlabGPL-2.0000