Chananchida Sang-aram's repositories
DSTG
Deconvoluting Spatial Transcriptomics Data through Graph-based Artificial Intelligence
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nichenetr
NicheNet: predict active ligand-target links between interacting cells
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scriabin
Analysis of cell-cell communication at single-cell resolution
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sknw
build net work from skeleton image (2D-3D)
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stereoscope
Spatial mapping of cell types by integration of transcriptomics data
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STRIDE
STRIDE (Spatial TRanscRIptomics DEconvolution by topic modelling) is a cell-type deconvolution tool for spatial transcriptomics by using single-cell transcriptomics data.
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synthvisium
synthvisium: package to generate synthetic Visium-like spot data
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synthvisium-1
synthvisium: package to generate synthetic Visium-like spot data
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