cryos

avogadro

Avogadro 1 is not under active development, the repository was archived in September 2021. Development of Avogadro 2 is being done at https://github.com/openchemistry/avogadrolibs. Avogadro is an advanced molecular editor designed for cross-platform use in computational chemistry, molecular modeling, bioinformatics, materials science, and related areas.

avogadro-squared

Avogadro superbuild project, builds Avogadro dependencies and then Avogadro itself

openchemistry

Supermodule containing submodules and external project to build all components

tomviz

Cross platform, open source application for the processing, visualization, and analysis of 3D tomography data

avogadroapp

Avogadro is an advanced molecular editor designed for cross-platform use in computational chemistry, molecular modeling, bioinformatics, materials science, and related areas.

avogadrolibs

Avogadro libraries provide 3D rendering, visualization, analysis and data processing useful in computational chemistry, molecular modeling, bioinformatics, materials science, and related areas.

blog

Source for my Hugo based blog

arptools

arrow

Apache Arrow is a multi-language toolbox for accelerated data interchange and in-memory processing

bluesky

experiment orchestration and data acquisition

bluesky-pods

Very experimental podman scripts for running bluesky and friends in a pod.

bluesky-queueserver

bluesky-webclient

A React Material UI based web client developed in TypeScript to enable acquisition of data on the web with bluesky

bluesky-widgets

Components for graphical applications that interact with bluesky libraries

cppx

Just exploration of some C++ with my son, likely nothing of too much interest to the wider world

cryos

More details about me and what I am up to

databroker

Unified API pulling data from multiple sources

databroker-client

A web client for DataBroker server using TypeScript, React and Material UI

databroker-server

HTTP server exposing the DataBroker API in a language agnostic way

hugo-icarus-theme

Port of Ruipeng Zhang's Hexo theme Icarus to Hugo.

qmicroscope

You probably don't want to use this yet...

qnetworktoy

A toy example using C++14, Qt 5 and hitting supplied URLs to echo data back

reprotomo2021

Talk for Computational Imaging track 2021

suitcase-dataexchange

tomoco

An experimental Qt-based GUI developed in Python for data acquisition at NSLS-II

tomopy

Tomographic Reconstruction in Python

tomviz-1

Tomviz conda environment

tomviz-superbuild

Superbuild to make packaging simpler for tomviz

velox

A C++ vectorized database acceleration library aimed to optimizing query engines and data processing systems.

workflow-testing

Just testing out workflow stuff...