cplab's repositories
ephys_analysis
Tutorials and scripts for analyzing electrophysiological data.
ClearMap
ClearMap is a python toolbox for the analysis and registration of volumetric data from cleared tissues.
klustakwik
Fast software for high-dimensional cluster analysis using the masked EM algorithm for Gaussians mixtures. (Can also be used in "classical" mode for standard hard EM algorithm).
Optimizer2
A command line optimization software
pycparser
Complete C99 parser in pure Python
annolid
An annotation and instance segmentation-based multiple animal tracking and behavior analysis package.
EPLNetwork_Schmuker
Online learning model of olfactory bulb external plexiform layer network (Imam & Cleland 2020)
odorsampling
Model of physicochemical odor sampling by animal olfactory systems
pyreg
Image registration package for python