Beast code in Giters

cozygene's repositories

FEAST

Fast expectation maximization for microbial source tracking

Language:RNOASSERTION114 16 61

bisque

An R toolkit for estimation of cell composition from bulk expression data

Language:R68 4 35

refactor

Language:Python25 6 3

glint

Language:Python21 7 16

TCA

Language:R17 7 23

EHR_MRS_UCLA

A public repo to share methylation risk scores (MRS) derived from UCLA's electronic health records.

Language:RNOASSERTION9 130

MTV-LMM

Scalable and computationally efficient tool to identify and predict autoregressive taxa

Language:R9 90

albi

FIESTA (Fast confidence IntErvals using STochastic Approximation) and ALBI (Accurate LMM-based heritability Bootstrap confidence Intervals)

Language:Python7 3 1

RL-SKAT

RL-SKAT (Recalibrated Lightweight Sequence Kernel Association Test)

Language:PythonGPL-3.05 60

CONFINED

Generates components that capture sources of variability that are shared between two datasets.

Language:RGPL-3.04 7 1

CONTENT

Language:RGPL-3.03 120

feather

Permutation testing for heritability and set-tests.

Language:PythonGPL-3.02 7 5

BayesCCE

Language:MATLAB1 8 2

SLIViT

An AI framework for clinical diagnosis of 3D biomedical-imaging data

Language:Python100

Unico

Language:RBSD-3-Clause1 110

CellTypeSpecificMethylationAnalysis

Package for replicating experiments in Rahmani et al. (2021)

Language:R040

check1

Language:Python050

halperingpu

0110

refactor-theory

070

ucla_docs

030