Computational Biology Lab at the University of Toronto

Computational Biology Lab at the University of Toronto's repositories

medsavant

MedSavant is a search engine for genetic variants

Language:Java22 9 345

savant

Savant is a next-generation genome browser designed for the latest generation of genome data

Language:Java12 9 15

shrimp

SHRiMP is a software package for aligning genomic reads against a target genome.

Language:CNOASSERTION8 3 1

fCNV

a probabilistic method for non-invasive analysis of de novo CNVs in fetal genome based on maternal plasma sequencing

Language:Python5 30

alu-detect

aludetect

Language:C++4 2 1

FSDA

Language:Python4 60

cnv-prioritization

Language:Python3 30

CouGaR-viz

Language:Racket3 40

CouGaR

Mini Chromosome

Language:C++2 50

mrspec

A database query and visualization engine for magnetic resonance spectroscopy data collected from a clinical cohort at SickKids hospital.

Language:JavaScript2 40

annotation-formatter

Language:Perl1 80

genomesavant-site

genomesavant

Language:JavaScript090

jannovar

Java framework for annotating VCF files with gene/transcript-based annotations

Language:Java030

pathways-app

Pathways app for MedSavant

Language:JavaLGPL-3.0070

pharmacogenomics

Language:JavaLGPL-3.0020

savant-sdk

SDK for developing Savant extensions

Language:Java030

silva

SilVA: Silent Variant Analysis using random forests

Language:PythonGPL-3.0040

tegetype

Language:C++040