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Machine Learning & Bioinformatics Lab.'s repositories

High precision, marker-based, hierarchical cell-type annotation tool for single-cell RNA-seq data

Language:Jupyter NotebookMIT7 1 5

An easy-to-use R wrapper function to run celltype identifiers for single-cell RNA-seq data

Language:Jupyter Notebook3 1 1

A visualization package to explore the SCODA results

Language:Jupyter NotebookGPL-3.02 10

An annotation-guided transcriptome assembler

Language:Python2 20

MarkerCount is a python3 cell-type identification toolkit for single-cell RNA-Seq experiments.

Language:Jupyter NotebookMIT1 1 1

Ploidy inference from CNV estimates

MIT000

The package contains functions to generate KEGG pathview images from SCODA result.

Language:Jupyter NotebookMIT000