Aditya Singh's repositories
ATACseq-workshop
Data and code for ATAC-seq analysis workshop in R
awesome-genome-visualization
A list of interesting genome browser or genome-browser-like implementations
biofx_python
Code for Mastering Python for Bioinformatics (O'Reilly, 2021, ISBN 9781098100889)
bioinformatics-one-liners
Bioinformatics one liners from Ming Tang
bioinformatics-workflows
minimal example implementations for bioinformatics workflow managers
biostar-recipes
Tools, Pipelines for the Biostar Engine
blogs
Links to data science, bioinformatics, statistics, and machine learning resources
ChIP-seq-analysis
ChIP-seq analysis notes from Ming Tang
CourseworkCoding
Codes involved in the coursework.
htsdiagnostics
Software for diagnostic testing based on high-throughput sequencing
indrop
Single cell transcriptome analysis pipeline based on DropEst
learning_vcf_file
Learning the Variant Call Format
machine_learning
Machine learning in R
mlwpy_code
Code from the Pearson Addison-Wesley book Machine Learning with Python for Everyone
MOP2
Master of Pores 2
Py4Bio
Public data for the book Python for Bioinformatics
Python-for-Bioinformatics
Python for Bioinformatics consist of a variety of python programmes,frequently used by bioinformaticians while handling biological data especially raw NGS data.
RNA-seq-analysis
RNAseq analysis notes from Ming Tang
rnaseq
RNA-seq analyses.
RNAseq-workshop
Data and code for RNA-seq analysis workshop in R
SARS-CoV-2_Sequencing
A collection of sequencing protocols and bioinformatic resources for SARS-CoV-2 sequencing.
scRNA-seq_notes
A list of scRNA-seq analysis tools
scRNAseq-analysis-notes
scRNAseq analysis notes from Ming Tang