:zap: optimize `samtools/depth` step
bunop opened this issue · comments
Paolo Cozzi commented
-
use bgzip with multi-threads when creatingsamtools/depth
- try to split
samtools/depth
by chromosomes - raise
samtools/depth
required time
Nextflow resequencing pipeline with bwa-mem and freebayes
bunop opened this issue · comments
samtools/depth
samtools/depth
by chromosomessamtools/depth
required time