Wei Zhao's repositories
awesome-cryoem
A collaborative list of awesome CryoEM (Cryo Electron Microscopy) resources.
myunixconfig
my Unix configuration file including Mac, Linux
shellscripts
shellscripts
atomIDE
atomIDE
awesome-programming-books
经典编程书籍大全，涵盖：计算机系统与网络、系统架构、算法与数据结构、前端开发、后端开发、移动开发、数据库、测试、项目与团队、程序员职业修炼、求职面试等
gala
Automatic segmentation of electron microscopy volumes
JavaPyR
my program book including Python, Java, and R.
linux_config
My linux config file. .bash_profile .alias bin .vimrc etc.
matlab-storm
GUIs and functions for analyzing STORM data in MATLAB
motioncorr
motion correction for movies recorded using direct electron detectors
notero
A Zotero plugin for syncing items into Notion
palm-siever
Visualization and analysis platform for single-molecule localization microscopy
plotly.py
the browser-based graphing library for python
PyQSTEM
A Python interface to the electron microscopy simulation program QSTEM
Rdocumentation
Integrate R with http://www.Rdocumentation.org
Relion
Scripts for using the Relion package for single particle cryo-electron microscopy (cryo-EM)
relion-1
Image-processing software for cryo-electron microscopy
StitchEM
A set of tools for serial electron microscopy image stitching and alignment.
storm-analysis
Zhuang lab STORM movie analysis code
topaz
Pipeline for particle picking in cryo-electron microscopy images using convolutional neural networks trained from positive and unlabeled examples. Also featuring micrograph and tomogram denoising with DNNs.
xmipp
Xmipp is a suite of image processing programs, primarily aimed at single-particle 3D electron microscopy.