clintval / cvbio

Artisanal 🤣 bioinformatics tools and pipelines in Scala

https://github.com/clintval/cvbio#cvbio

clintval/cvbio Issues

Feature Request: Disambiguate using UMIs
Closed 4 months ago5
cvbio runs into error with recent openjdk version
Updated 2 years ago1
Could render one CLI option a bit clearer
Closed 5 years ago
Have a timeout set for connecting to IGV
Closed 5 years ago
Meshed Read Pairs
Closed 5 years ago1
That one good idea I had for a new take on FASTQ quality visualization
Updated 5 years ago
RelabelReferenceNames should accept gzipped input and output
Closed 5 years ago
Preferences should have an associated type, refactor needed?
Updated 5 years ago
Small documentation error in `Igv.scala`
Closed 5 years ago
A way to create automatic IGV snapshots in single-window or split-window mode
Updated 5 years ago
IGV boss SVG output to have a height and width
Updated 5 years ago
Code coverage is currently broken, although test coverage should be high
Closed 5 years ago1