Carl R Hutter's repositories
FrogCap-Sequence-Capture
Probe set files and pipeline for the analysis of data acquired from the Hutter et al. (2021) sequence capture probe set for all frogs
AstralPlane
AstralPlane: R Package For Preparing, Running, Analyzing and Plotting from the Species Tree Program ASTRAL-III
PhyloProcessR
R package for processing high-throughput sequencing data from targeted sequence capture for phylogenomic analyses
MitoTrawlR
An R package for processing high-throughput sequence data from raw reads to alignments from mitochondrial genomes sequenced as by-catch
PhyloConfigR
Configures various phylogenetic software input and output parsing
murinae-seq
Resources and documents relating to the large-scale rodent sequencing projects.
VenomCap
A sequence capture probe-set to capture venom and toxin -related genes found in snakes