christinadelta / Py_EEGanalyses

Guide and pipeline for preprocessing and analysing M/EEG data with python

Py_EEGanalyses

Guide and pipeline for preprocessing and analysing M/EEG data with python and MNE

This guide contains jupyter notebooks and correspondinng py scripts.

To install the MNE toolbox for M/EEG analyses use either conda or pip.

Install with pip:

pip install mne

Dependencies:

These dependencies are needed when MNE is installed with pip.

For minimum functionality: Python3, numpy, scipy,

For full functionality: Matplotlib, Scikit-learn, Numba, NiBabel, Pandas, Picard, CuPy, DIPY, Imageio, PyVista, pyvistaqt, mffpy

NOTEBOOKS FOLDER:

The notebooks folder contains 2 subfolders:

• Preprocessing
• Analyses

Both Preprocessing and Analyses are done in several steps.